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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs149012957 chr18:37048501 G/C PRHOXNB chr13:28552243-28562774:- 0.79 9.95 1.25E-13 Box Plot
ACC rs149032979 chr5:120324253 A/T GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs149128948 chr12:110131196 G/GGA OR5V1 chr6:29323007-29399744:- 0.61 8.68 1.08E-11 Box Plot
ACC rs149487177 chr1:119535624 A/AGG PRHOXNB chr13:28552243-28562774:- 0.72 11.04 3.07E-15 Box Plot
ACC rs149685442 chr2:107393289 GATTC/G PRAMEF16 chr1:13495254-13498260:+ 0.67 9.56 4.72E-13 Box Plot
ACC rs149811193 chr8:112817022 CTAAT/C KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot
ACC rs149811193 chr8:112817022 CTAAT/C KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs149934370 chr5:120319532 C/T GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs150115 chr6:167507658 A/G PRHOXNB chr13:28552243-28562774:- 0.58 7.94 1.56E-10 Box Plot
ACC rs150527498 chr3:128548310 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs150621944 chr3:128552471 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs150858117 chr5:120319198 C/G GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs150931442 chr2:224182187 A/T PRHOXNB chr13:28552243-28562774:- 0.59 7.99 1.3E-10 Box Plot
ACC rs151038265 chr2:107375046 G/A PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs151144580 chr1:26835674 C/T GAGE2D chrX:49207160-49214420:+ 0.68 8.06 1.02E-10 Box Plot